Abstract In this article, we prove that double quasi-Poisson algebras, which are noncommutative analogues of quasi-Poisson manifolds, naturally give rise to pre-Calabi-Yau algebras. This extends one of the main results in [11], where a correspondence between certain pre-Calabi-Yau algebras and double Poisson algebras was found (see also [13, 12, 10]). However, a major difference between the pre-Calabi-Yau algebra constructed in the mentioned articles and the one constructed in this work is that the higher multiplications indexed by even integers of the underlying $A_{\infty }$-algebra structure of the pre-Calabi-Yau algebra associated with double quasi-Poisson algebra do not vanish, but are given by nice cyclic expressions multiplied by explicitly determined coefficients involving the Bernoulli numbers.