T. J. Stevens and I. T. Arkin, Do more complex organisms have a greater proportion of membrane proteins in their genomes?, Proteins, vol.39, pp.417-420, 2000.

A. L. Hopkins and C. R. Groom, The druggable genome, Nat Rev Drug Discov, vol.1, pp.727-730, 2002.

S. Tan, H. T. Tan, and M. C. Chung, Membrane proteins and membrane proteomics, Proteomics, vol.8, pp.3924-3932, 2008.

V. Santoni, M. Molloy, and T. Rabilloud, Membrane proteins and proteomics: un amour impossible?, Electrophoresis, vol.21, pp.1054-1070, 2000.

T. Rabilloud, Membrane proteins and proteomics: love is possible, but so difficult, Electrophoresis Suppl, vol.1, pp.174-180, 2009.
URL : https://hal.archives-ouvertes.fr/hal-00394615

T. Rabilloud, M. Chevallet, S. Luche, and C. Lelong, Two-dimensional gel electrophoresis in proteomics: Past, present and future, J Proteomics, vol.73, pp.2064-2077, 2010.
URL : https://hal.archives-ouvertes.fr/hal-00509715

A. M. Seddon, P. Curnow, and P. J. Booth, Membrane proteins, lipids and detergents: not just a soap opera, Biochim Biophys Acta, vol.1666, pp.105-117, 2004.

D. Linke, Detergents: an overview, Methods Enzymol, vol.463, pp.603-617, 2009.

T. Arnold and D. Linke, The use of detergents to purify membrane proteins, Curr Protoc Protein Sci Chapter, 2008.

A. Bagag, A. Giuliani, F. Canon, M. Réfrégiers, L. Naour et al., Separation of peptides from detergents using ion mobility spectrometry, Rapid Commun Mass Spectrom, vol.25, pp.3436-3440, 2011.
URL : https://hal.archives-ouvertes.fr/hal-02643596

J. M. Gilmore and M. P. Washburn, Advances in shotgun proteomics and the analysis of membrane proteomes, J Proteomics, vol.73, pp.2078-2091, 2010.

Y. Lin, Y. Liu, J. Li, Y. Zhao, and Q. He, Evaluation and optimization of removal of an acid-insoluble surfactant for shotgun analysis of membrane proteome, Electrophoresis, vol.31, pp.2705-2713, 2010.

N. Bensalem, S. Masscheleyn, J. Mozo, B. Vallée, and F. Brouillard, High sensitivity identification of membrane proteins by MALDI TOF-mass spectrometry using polystyrene beads, J Proteome Res, vol.6, pp.1595-1602, 2007.

M. Rey, H. Mrázek, P. Pompach, P. Novák, and L. Pelosi, Effective removal of nonionic detergents in protein mass spectrometry, hydrogen/ deuterium exchange, and proteomics, Anal Chem, vol.82, pp.5107-5116, 2010.

C. C. Wu and J. R. Yates, The application of mass spectrometry to membrane proteomics, Nat Biotechnol, vol.21, pp.262-267, 2003.

L. Naour, F. André, M. Boucheix, C. Rubinstein, and E. , Membrane microdomains and proteomics: lessons from tetraspanin microdomains and comparison with lipid rafts, Proteomics, vol.6, pp.6447-6454, 2006.

A. E. Speers and C. C. Wu, Proteomics of integral membrane proteins-theory and application, Chem Rev, vol.107, pp.3687-3714, 2007.

B. Lu, D. B. Mcclatchy, J. Y. Kim, and J. R. Yates, Strategies for shotgun identification of integral membrane proteins by tandem mass spectrometry, Proteomics, vol.8, pp.3947-3955, 2008.

J. N. Savas, B. D. Stein, C. C. Wu, and J. R. Yates, Mass spectrometry accelerates membrane protein analysis, Trends Biochem Sci, vol.36, pp.388-396, 2011.

D. B. Robb, T. R. Covey, and A. P. Bruins, Atmospheric pressure photoionization: an ionization method for liquid chromatography-mass spectrometry, Anal Chem, vol.72, pp.3653-3659, 2000.

J. A. Syage, Mechanism of [M+H]+ formation in photoionization mass spectrometry, J Am Soc Mass Spectrom, vol.15, pp.1521-1533, 2004.

A. Delobel, F. Halgand, B. Laffranchise-gosse, H. Snijders, and O. Laprévote, Characterization of hydrophobic peptides by atmospheric pressure photoionization-mass spectrometry and tandem mass spectrometry, Anal Chem, vol.75, pp.5961-5968, 2003.

A. Bagag, A. Giuliani, and O. Laprevote, Atmospheric pressure photoionization of peptides, Int. J. Mass Spectrom, vol.299, pp.1-4, 2011.
URL : https://hal.archives-ouvertes.fr/hal-00551618

A. Bagag, A. Giuliani, M. Réfrégiers, L. Naour, and F. , Atmospheric pressure photoionization study of post-translational modifications: the case of palmitoylation, Int. J. Mass Spectrom, vol.328, pp.23-27, 2012.
URL : https://hal.archives-ouvertes.fr/hal-02645161

M. Gaudin, L. Imbert, D. Libong, P. Chaminade, and A. Brunelle, Atmospheric pressure photoionization as a powerful tool for large-scale lipidomic studies, J Am Soc Mass Spectrom, vol.23, pp.869-879, 2012.
URL : https://hal.archives-ouvertes.fr/hal-00690894

E. Steinfels, C. Orelle, O. Dalmas, F. Penin, and B. Miroux, Highly efficient over-production in E. coli of YvcC, a multidrug-like ATP-binding cassette transporter from Bacillus subtilis, Biochim Biophys Acta, vol.1565, pp.1-5, 2002.
URL : https://hal.archives-ouvertes.fr/hal-00312994

C. Orelle, O. Dalmas, P. Gros, D. Pietro, A. Jault et al., The conserved glutamate residue adjacent to the Walker-B motif is the catalytic base for ATP hydrolysis in the ATP-binding cassette transporter BmrA, J Biol Chem, vol.278, pp.47002-47008, 2003.
URL : https://hal.archives-ouvertes.fr/hal-00313606

A. Giuliani, F. Jamme, V. Rouam, F. Wien, and J. L. Giorgetta, DISCO: a low-energy multipurpose beamline at synchrotron SOLEIL, J Synchrotron Radiat, vol.16, pp.835-841, 2009.
URL : https://hal.archives-ouvertes.fr/hal-01479318

A. Giuliani, J. L. Giorgetta, J. P. Ricaud, F. Jamme, and V. Rouam, Atmospheric pressure photoionization using tunable VUV synchrotron radiation, Nucl. Instrum. Methods Phys. Res. B, vol.279, pp.114-117, 2012.
URL : https://hal.archives-ouvertes.fr/hal-02650785

T. J. Kauppila, T. Kuuranne, E. C. Meurer, M. N. Eberlin, T. Kotiaho et al., Atmospheric pressure photoionization mass spectrometry. Ionization mechanism and the effect of solvent on the ionization of naphthalenes, Anal Chem, vol.74, pp.5470-5479, 2002.

L. Naour, F. Charrin, S. Labas, V. , L. Caer et al., Tetraspanins connect several types of Ig proteins: IgM is a novel component of the tetraspanin web on B-lymphoid cells, Cancer Immunol Immunother, vol.53, pp.148-152, 2004.

M. André, C. Chambrion, S. Charrin, S. Soave, and J. Chaker, In situ chemical cross-linking on living cells reveals CD9P-1 cis-oligomer at cell surface, J Proteomics, vol.73, pp.93-102, 2009.

C. Chambrion, L. Naour, and F. , The tetraspanins CD9 and CD81 regulate CD9P1-induced effects on cell migration, PLoS One, vol.5, p.11219, 2010.

J. Kyte and R. F. Doolittle, A simple method for displaying the hydropathic character of a protein, J Mol Biol, vol.157, pp.105-132, 1982.

M. André, L. Caer, J. P. Greco, C. Planchon, S. et al., Proteomic analysis of the tetraspanin web using LC-ESI-MS/MS and MALDI-FTICR-MS, Proteomics, vol.6, pp.1437-1449, 2006.

S. Cristoni, L. R. Bernardi, I. Biunno, and F. Guidugli, Analysis of peptides using partial (no discharge) atmospheric pressure chemical ionization conditions with ion trap mass spectrometry, Rapid Commun Mass Spectrom, vol.16, pp.1686-1691, 2002.

D. Debois, A. Giuliani, and O. Laprévote, Fragmentation induced in atmospheric pressure photoionization of peptides, J Mass Spectrom, vol.41, pp.1554-1560, 2006.
URL : https://hal.archives-ouvertes.fr/hal-00123653

A. Giuliani, D. Debois, and O. Laprévote, Study of a bisquaternary ammonium salt by atmospheric pressure photoionization mass spectrometry, Eur J Mass Spectrom, vol.12, pp.189-97, 2006.
URL : https://hal.archives-ouvertes.fr/hal-00089074

K. Biemann, Mass Spectrometry of Peptides and Proteins, Annual Review of Biochemistry, vol.61, pp.977-1010, 1992.

J. Carroll, M. C. Altman, I. M. Fearnley, and J. E. Walker, Identification of membrane proteins by tandem mass spectrometry of protein ions, Proc Natl Acad Sci U S A, vol.104, pp.14330-14335, 2007.

A. L. Davidson, E. Dassa, O. C. , and C. J. , Structure, function, and evolution of bacterial ATP-binding cassette systems, Microbiol Mol Biol Rev, vol.72, pp.317-364, 2008.
URL : https://hal.archives-ouvertes.fr/hal-00319506

M. A. Do-cao, S. Crouzy, M. Kim, M. Becchi, and D. S. Cafiso, Probing the conformation of the resting state of a bacterial multidrug ABC transporter, BmrA, by a site-directed spin labeling approach, Protein Sci, vol.18, pp.1507-1520, 2009.
URL : https://hal.archives-ouvertes.fr/hal-00391211

S. Ravaud, D. Cao, M. A. Jidenko, M. Ebel, C. et al., The ABC transporter BmrA from Bacillus subtilis is a functional dimer when in a detergent-solubilized state, Biochem J, vol.395, pp.345-353, 2006.
URL : https://hal.archives-ouvertes.fr/hal-00313530

C. Galián, F. Manon, M. Dezi, C. Torres, and C. Ebel, Optimized purification of a heterodimeric ABC transporter in a highly stable form amenable to 2-D crystallization, PLoS One, vol.6, p.19677, 2011.

R. Matar-merheb, M. Rhimi, A. Leydier, F. Huché, and C. Galián, Structuring detergents for extracting and stabilizing functional membrane proteins, PLoS One, vol.6, p.18036, 2011.
URL : https://hal.archives-ouvertes.fr/hal-02650286

J. Funk, X. Li, and T. Franz, Threshold values for detergents in protein and peptide samples for mass spectrometry, Rapid Commun Mass Spectrom, vol.19, pp.2986-2988, 2005.

L. L. Ilag, I. Ubarretxena-belandia, C. G. Tate, and C. V. Robinson, Drug binding revealed by tandem mass spectrometry of a protein-micelle complex, J Am Chem Soc, vol.126, pp.14362-14363, 2004.