Transcription factors: from enhancer binding to developmental control, Nat. Rev. Genet, vol.13, pp.613-626, 2012. ,
Transcriptional enhancers: from properties to genome-wide predictions, Nat. Rev. Genet, vol.15, pp.272-286, 2014. ,
, A Handbook of Transcription Factors, vol.52, pp.25-73, 2011.
Absence of a simple code: how transcription factors read the genome, Trends Biochem. Sci, vol.39, pp.381-399, 2014. ,
Signalosome assembly by domains undergoing dynamic head-to-tail polymerization, Trends Biochem. Sci, vol.39, pp.487-495, 2014. ,
Genomic and biochemical insights into the specificity of ETS transcription factors, Annu. Rev. Biochem, vol.80, pp.437-471, 2011. ,
Structural basis for oligomerization of auxin transcriptional regulators, Nat. Commun, vol.5, p.3617, 2014. ,
URL : https://hal.archives-ouvertes.fr/hal-00984482
Co-operative DNA binding by GAGA transcription factor requires the conserved BTB / POZ domain and reorganizes promoter topology, EMBO J, vol.18, pp.698-708, 1999. ,
DNA wrapping and distortion by an oligomeric homeodomain protein, J. Mol. Biol, vol.383, pp.10-23, 2008. ,
The LEAFY floral regulators in angiosperms: conserved proteins with diverse roles, J. Plant Biol, vol.52, pp.177-185, 2009. ,
URL : https://hal.archives-ouvertes.fr/hal-00400616
, Trends Plant Sci, vol.15, pp.346-352, 2010.
The flowering of Arabidopsis flower development, Plant J, vol.61, pp.1014-1028, 2010. ,
Floral meristem initiation and emergence in plants, Cell. Mol. Life Sci, vol.69, pp.3807-3818, 2012. ,
The end of innocence: flowering networks explode in complexity, Curr. Opin. Plant Biol, vol.15, pp.45-50, 2012. ,
A variant of LEAFY reveals its capacity to stimulate meristem development by inducing RAX1, Plant J, vol.74, pp.678-689, 2013. ,
URL : https://hal.archives-ouvertes.fr/hal-00843005
A molecular framework for auxin-mediated initiation of flower primordia, Dev. Cell, vol.24, pp.271-282, 2013. ,
Prediction of regulatory interactions from genome sequences using a biophysical model for the Arabidopsis LEAFY transcription factor, Plant Cell, vol.23, pp.1293-1306, 2011. ,
URL : https://hal.archives-ouvertes.fr/hal-00607237
LEAFY target genes reveal floral regulatory logic, cis motifs, and a link to biotic stimulus response, Dev. Cell, vol.20, pp.430-443, 2011. ,
URL : https://hal.archives-ouvertes.fr/hal-00606366
A developmental switch sufficient for flower initiation in diverse plants, Nature, vol.377, pp.495-500, 1995. ,
WUSCHEL induces shoot stem cell activity and developmental plasticity in the root meristem, Genes Dev, vol.18, pp.375-380, 2004. ,
An activated form of UFO alters leaf development and produces ectopic floral and inflorescence meristems, PLoS ONE, vol.8, p.83807, 2013. ,
Regulation of transcription in plants: mechanisms controlling developmental switches, Nat. Rev. Genet, vol.11, pp.830-842, 2010. ,
Gene activation and cell fate control in plants: a chromatin perspective, Cell. Mol. Life Sci, vol.71, pp.3119-3137, 2014. ,
URL : https://hal.archives-ouvertes.fr/hal-00981459
A promiscuous intermediate underlies the evolution of LEAFY DNA binding specificity, Science, vol.343, pp.645-648, 2014. ,
URL : https://hal.archives-ouvertes.fr/hal-01141179
Structural basis for LEAFY floral switch function and similarity with helix-turn-helix proteins, EMBO J, vol.27, pp.2628-2637, 2008. ,
MORPHEUS, a webtool for transcription factor binding analysis using position weight matrices with dependency, PLoS ONE, vol.10, p.135586, 2015. ,
URL : https://hal.archives-ouvertes.fr/hal-01217854
A conserved domain in the N-terminus is important for LEAFY dimerization and function in Arabidopsis thaliana, Plant J, vol.71, pp.736-749, 2012. ,
The many faces of SAM, Sci. STKE, p.7, 2005. ,
Identifying polymer-forming SAM domains, Proteins, vol.74, pp.1-5, 2009. ,
Polymerization of the SAM domain of TEL in leukemogenesis and transcriptional repression, EMBO J, vol.20, pp.4173-4182, 2001. ,
ABERRANT PANICLE ORGANIZATION 2/RFL, the rice ortholog of Arabidopsis LEAFY, suppresses the transition from inflorescence meristem to floral meristem through interaction with APO1, Plant J, vol.69, pp.168-180, 2012. ,
UFO: an Arabidopsis gene involved in both floral meristem and floral organ development, Plant Cell, vol.7, pp.529-548, 1995. ,
LEAFY controls floral meristem identity in Arabidopsis, Cell, vol.69, pp.843-859, 1992. ,
DNA binding by the ETS protein TEL (ETV6) is regulated by autoinhibition and self-association, J. Biol. Chem, vol.285, pp.18496-18504, 2010. ,
Integrating long-day flowering signals: a LEAFY binding site is essential for proper photoperiodic activation of APETALA1, Plant J, vol.67, pp.1094-1102, 2011. ,
URL : https://hal.archives-ouvertes.fr/hal-00635972
Sterile alpha motif domain-mediated self-association plays an essential role in modulating the activity of the Drosophila ETS family transcriptional repressor Yan, Mol. Cell. Biol, vol.30, pp.1158-1170, 2010. ,
SAM domain polymerization links subnuclear clustering of PRC1 to gene silencing, Dev. Cell, vol.26, pp.565-577, 2013. ,
The relationship between long-range chromatin occupancy and polymerization of the Drosophila ETS family transcriptional repressor Yan, Genetics, vol.193, pp.633-649, 2013. ,
Genome-wide identification of regulatory DNA elements and protein-binding footprints using signatures of open chromatin in Arabidopsis, Plant Cell, vol.24, pp.2719-2731, 2012. ,
Mapping and dynamics of regulatory DNA and transcription factor networks in A. thaliana, Cell Rep, vol.8, 2014. ,
The floral regulator LEAFY evolves by substitutions in the DNA binding domain, Science, vol.308, pp.260-263, 2005. ,
How to make a biological switch, J. Theor. Biol, vol.203, pp.117-133, 2000. ,
Bicoid cooperative DNA binding is critical for embryonic patterning in Drosophila, Proc. Natl Acad. Sci. USA, vol.102, pp.13176-13181, 2005. ,
Predicting expression patterns from regulatory sequence in Drosophila segmentation, Nature, vol.451, pp.535-540, 2008. ,
LEAFY expression and flower initiation in Arabidopsis, Development, vol.124, pp.3835-3844, 1997. ,
Discovery of directional and nondirectional pioneer transcription factors by modeling DNase profile magnitude and shape, Nat. Biotechnol, vol.32, pp.171-178, 2014. ,
Dynamic regulation of transcriptional states by chromatin and transcription factors, Nat. Rev. Genet, vol.15, pp.69-81, 2014. ,
Mechanisms by which transcription factors gain access to target sequence elements in chromatin, Curr. Opin. Genet. Dev, vol.23, pp.116-123, 2013. ,
Pioneer transcription factors in cell reprogramming28, pp.2679-2692, 2014. ,
SWI2/SNF2 chromatin remodeling ATPases overcome polycomb repression and control floral organ identity with the LEAFY and SEPALLATA3 transcription factors, Proc. Natl Acad. Sci. USA, vol.109, pp.3576-3581, 2012. ,
Characterization of MADS-domain transcription factor complexes in Arabidopsis flower development, Proc. Natl Acad. Sci, vol.109, pp.1560-1565, 2012. ,
URL : https://hal.archives-ouvertes.fr/hal-00672640
Dynamics of chromatin accessibility and gene regulation by MADS-domain transcription factors in flower development, Genome Biol, vol.15, p.41, 2014. ,
Agrobacteriummediated transformation of Arabidopsis thaliana using the floral dip method, Nat. Protoc, vol.1, pp.641-646, 2006. ,
Simplified screening for the detection of soluble fusion constructs expressed in E. coli using a modular set of vectors, Microb. Cell Fact, vol.4, p.34, 2005. ,
A rapid and sensitive method for the quantitation of microgram quantities of protein utilizing the principle of protein-dye binding, Anal. Biochem, vol.72, pp.248-254, 1976. ,
The ID23-2 structural biology microfocus beamline at the ESRF, J. Synchrotron Radiat, vol.17, pp.107-118, 2010. ,
Experimental phasing with SHELXC/D/E: combining chain tracing with density modification, Acta Crystallogr. D Biol. Crystallogr, vol.66, pp.479-485, 2010. ,
Generation, representation and flow of phase information in structure determination: recent developments in and around SHARP 2.0, Acta Crystallogr. D Biol. Crystallogr, vol.59, pp.2023-2030, 2003. ,
Generic representation and evaluation of properties as a function of position in reciprocal space, J. Appl. Crystallogr, vol.35, pp.655-663, 2002. ,
The Buccaneer software for automated model building. 1. Tracing protein chains, Acta Crystallogr. D Biol. Crystallogr, vol.62, pp.1002-1011, 2006. ,
Coot: model-building tools for molecular graphics, Acta Crystallogr. D Biol. Crystallogr, vol.60, pp.2126-2132, 2004. ,
, , 2011.
Purification and characterization of acetohydroxyacid reductoisomerase from spinach chloroplasts, Biochem. J, vol.262, pp.971-976, 1989. ,
calculating evolutionary conservation in sequence and structure of proteins and nucleic acids, Nucleic Acids Res, vol.38, pp.529-533, 2010. ,
Sequencing of natural strains of Arabidopsis thaliana with short reads, Genome Res, vol.18, pp.2024-2033, 2008. ,
Structural basis of p63a SAM domain mutants involved in AEC syndrome, FEBS J, vol.278, pp.2680-2688, 2011. ,