Preclinical whole-body uorescence imaging : Review of instruments, methods and applications, Journal of photochemistry and photobiology. B, Biology, vol.98, p.7794, 2010. ,
Diuse radiation in the galaxy, Annales d'Astrophysique, p.117, 1940. ,
A review of the optical properties of biological tissues, IEEE Journal of Quantum Electronics, vol.26, issue.12, p.21662185, 1990. ,
DOI : 10.1109/3.64354
Biomedical photonics handbook, 2003. ,
DOI : 10.1117/1.1776177
Tomographic bioluminescence imaging by use of a combined optical-PET (OPET) system: a computer simulation feasibility study, Physics in Medicine and Biology, vol.50, issue.17, p.42254241, 2005. ,
DOI : 10.1088/0031-9155/50/17/021
Diffusion of light in turbid material, Applied Optics, vol.28, issue.12, pp.2210-2215, 1989. ,
DOI : 10.1364/AO.28.002210
Chapter 2 -scattering and absorption of a wave by a single particle, Wave Propagation and Scattering in Random Media, p.940, 1978. ,
Diffusion of a pulse in densely distributed scatterers, Journal of the Optical Society of America, vol.68, issue.8, p.1045, 1917. ,
DOI : 10.1364/JOSA.68.001045
Theory and application of wave propagation and scattering in random media, Proceedings of the IEEE, p.10301061, 1977. ,
DOI : 10.1109/PROC.1977.10612
Stochastic Problems in Physics and Astronomy, Reviews of Modern Physics, vol.15, issue.1, p.189, 1943. ,
DOI : 10.1103/RevModPhys.15.1
Light diusion through a turbid parallelepiped, Journal of the Optical Society of America A, vol.22, p.18831888, 2005. ,
DOI : 10.1364/josaa.22.001883
Optical tomography using the time-independent equation of radiative transferpart 2 : inverse model, Journal of Quantitative Spectroscopy and Radiative Transfer, vol.72, p.715732, 2002. ,
Fluorescence Tomography with the Frequency Domain Equation of Radiative Transfer, Biomedical Optics, p.67, 2008. ,
DOI : 10.1364/BIOMED.2008.BTuF67
The inverse source problem based on the radiative transfer equation in optical molecular imaging, Journal of Computational Physics, vol.202, issue.1, p.323345, 2005. ,
DOI : 10.1016/j.jcp.2004.07.008
Optical tomography in medical imaging, Inverse Problems, vol.15, issue.2, p.41, 1999. ,
DOI : 10.1088/0266-5611/15/2/022
Simplied spherical harmonics approximation of the time-dependent equation of radiative transfer for the forward problem in time-domain diuse optical tomography, p.71740371740311, 2009. ,
Light transport in biological tissue based on the simplied spherical harmonics equations, Journal of Computational Physics, vol.220, p.441470, 2006. ,
Three-dimensional optical tomography with the equation of radiative transfer, Journal of Electronic Imaging, vol.12, issue.4, p.594601, 2003. ,
DOI : 10.1117/1.1587730
Time resolved reectance and transmittance for the non-invasive measurement of tissue optical properties, Applied Optics, vol.28, p.23312336, 1989. ,
Principles of Fluorescence Spectroscopy, 2007. ,
DOI : 10.1007/978-0-387-46312-4
Condensed monte carlo simulations for the description of light transport, Applied Optics, vol.32, p.426434, 1993. ,
A monte carlo model of light propagation in tissue, SPIE Proceedings of Dosimetry of Laser Radiation in Medicine and Biology, p.102111, 1989. ,
In vivo near-infrared uorescence imaging, Current opinion in chemical biology, vol.7, p.626634, 2003. ,
Fluorescence imaging with near-infrared light : new technological advances that enable in vivo molecular imaging, European radiology, vol.13, p.195208, 2003. ,
Fluorescence-enhanced, near infrared diagnostic imaging with contrast agents, Current Opinion in Chemical Biology, vol.6, issue.5, p.642650, 2002. ,
DOI : 10.1016/S1367-5931(02)00356-3
Near-infrared uorescence : application to in vivo molecular imaging, Current opinion in chemical biology, vol.14, p.7179, 2010. ,
Building and breeding molecules to spy on cells and tumors, FEBS letters, vol.579, p.927932, 2005. ,
Protease sensors for bioimaging, Analytical and Bioanalytical Chemistry, vol.377, issue.6, p.956963, 2003. ,
DOI : 10.1007/s00216-003-2199-0
In vivo imaging of tumors with protease-activated near-infrared uorescent probes, Nature Biotechnology, vol.17, issue.4, p.375378, 1999. ,
Experimental three-dimensional uorescence reconstruction of diuse media by use of a normalized born approximation, Optics Letters, vol.26, p.893895, 2001. ,
Fluorescence molecular tomography in the presence of background uorescence, Physics in medicine and biology, vol.51, p.39834001, 2006. ,
Fluorescence molecular tomography resolves protease activity in vivo, Nature Medicine, vol.8, issue.7, p.757760, 2002. ,
DOI : 10.1038/nm729
X-Ray computed tomography in biomedical engineering, 2011. ,
DOI : 10.1007/978-0-85729-027-4
Positron Emission Tomography, 2005. ,
DOI : 10.1007/b136169
Image-guided surgery using invisible nearinfrared light : fundamentals of clinical translation, Molecular imaging, vol.9, pp.237-255, 2010. ,
Instrumentation for fast functional optical tomography, Review of Scientific Instruments, vol.73, issue.2, p.429439, 2002. ,
DOI : 10.1063/1.1427768
Calibration techniques and datatype extraction for time-resolved optical tomography, Review of Scientific Instruments, vol.71, issue.9, pp.3415-3427, 2000. ,
DOI : 10.1063/1.1287748
Broad bandwidth frequency domain instrument for quantitative tissue optical spectroscopy, Review of Scientific Instruments, vol.71, issue.6, p.25002513, 2000. ,
DOI : 10.1063/1.1150665
The FLARE intraoperative nearinfrared uorescence imaging system : a rst-in-human clinical trial in breast cancer sentinel lymph node mapping, Annals of surgical oncology, vol.16, p.29432952, 2009. ,
FluoSTIC: miniaturized fluorescence image-guided surgery system, Journal of Biomedical Optics, vol.17, issue.10, p.106014, 2012. ,
DOI : 10.1117/1.JBO.17.10.106014
URL : https://hal.archives-ouvertes.fr/hal-01131973
Molecular probes : Handbook of uorescent probes and research chemicals : By r p haugland. pp 390. interchim (molecular probes inc, PO box 22010 eugene, OR 97402-0414, USA, or 15 rue des champs, 92600 asnieres, paris), Biochemical Education, vol.15, issue.22 2, p.8383, 1994. ,
Nanocarriers as an emerging platform for cancer therapy, Nature Nanotechnology, vol.8, issue.12, p.751760, 2007. ,
DOI : 10.1038/nnano.2007.387
In vivo optical imaging of integrin ??V-??3 in mice using multivalent or monovalent cRGD targeting vectors, Molecular Cancer, vol.6, issue.1, p.41, 2007. ,
DOI : 10.1186/1476-4598-6-41
Activatable uorescent probes for tumour-targeting imaging in live mice, ChemMedChem, vol.1, issue.10, p.10691072, 2006. ,
Selective molecular imaging of viable cancer cells with pH-activatable uorescence probes, Nature Medicine, vol.15, p.104109, 2009. ,
Selection of Quantum Dot Wavelengths for Biomedical Assays and Imaging, Molecular Imaging, vol.2, issue.1, p.5064, 2003. ,
DOI : 10.1162/153535003765276282
In Vivo Fluorescence Spectroscopy and Imaging for Oncological Applications, Photochemistry and Photobiology, vol.34, issue.3, pp.603-632, 1998. ,
DOI : 10.1111/j.1751-1097.1998.tb02521.x
Ultraviolet-induced autouorescence characterization of normal and tumoral esophageal epithelium cells with quantitation of NAD(p)h, Photochemical & Photobiological Sciences, vol.5, p.483492, 2006. ,
Near-infrared autouorescence imaging for detection of cancer, Journal of biomedical optics, vol.9, p.587592, 2004. ,
Spectroscopic detection of bladder cancer using near-infrared imaging techniques, Journal of Biomedical Optics, vol.9, issue.4, p.767771, 2004. ,
DOI : 10.1117/1.1753587
Near-infrared autofluorescence imaging of cutaneous melanins and human skin in vivo, Journal of Biomedical Optics, vol.14, issue.2, p.24017, 2009. ,
DOI : 10.1117/1.3103310
In vivo diagnosis of colonic precancer and cancer using near-infrared autofluorescence spectroscopy and biochemical modeling, Journal of Biomedical Optics, vol.16, issue.6, p.67005, 2011. ,
DOI : 10.1117/1.3589099
Reduction of skin and food autouorescence in dierent mouse strains through diet changes, Society for Molecular Imaging, 2006. ,
Rening epiuorescence imaging and analysis with automated multiple-band at-eld correction, Nature Methods, vol.5, 2008. ,
Autofluorescence removal, multiplexing, and automated analysis methods for in-vivo fluorescence imaging, Journal of Biomedical Optics, vol.10, issue.4, p.41207, 2005. ,
DOI : 10.1117/1.2032458
Improved sensitivity by applying spectral unmixing prior to uorescent tomography, Biomedical Optics, OSA Technical Digest (CD), p.1, 2008. ,
Elimination of autouorescence in immunouorescence microscopy with digital image processing, Journal of Histochemistry & Cytochemistry, vol.43, p.727730, 1995. ,
Methods for reducing the eects of background autouorescence using IVIS imaging technology, tech. rep, 2004. ,
Visibility enhancement of uorescent objects hidden in animal tissues using spectral uorescence dierence method, Optics Communications, vol.147, p.1115, 1998. ,
Simple method for reduction of autouorescence in uorescence microscopy, Journal of Histochemistry & Cytochemistry, vol.50, p.437439, 2002. ,
A near-infrared dye for multichannel imaging, Chemical Communications, vol.110, issue.16, pp.1895-1897, 2008. ,
DOI : 10.1039/b719028j
Near-Infrared Phosphorescent Polymeric Nanomicelles: Efficient Optical Probes for Tumor Imaging and Detection, ACS Applied Materials & Interfaces, vol.1, issue.7, p.14741481, 2009. ,
DOI : 10.1021/am9001293
In vivo resolution of multiexponential decays of multiple near-infrared molecular probes by uorescence lifetime-gated wholebody time-resolved diuse optical imaging, Molecular imaging, vol.6, p.237246, 2007. ,
Fluorescence Properties and Metabolic Features of Indocyanine Green (ICG) as Related to Angiography, Survey of Ophthalmology, vol.45, issue.1, p.1527, 2000. ,
DOI : 10.1016/S0039-6257(00)00123-5
Handbook of Optics, Fundamentals, Techniques, and Design . Second Edition. McGraw-Hill Professional, 1994. ,
A review of attenuation correction techniques for tissue uorescence, Journal of the Royal Society Interface, vol.3, p.113, 2006. ,
Real-time intraoperative fluorescence imaging system using light-absorption correction, Journal of Biomedical Optics, vol.14, issue.6, p.64012, 2009. ,
DOI : 10.1117/1.3259362
Intraoperative application of optical spectroscopy in the presence of blood, IEEE Journal of Selected Topics in Quantum Electronics, vol.7, pp.996-1003, 2001. ,
Intracellular redox changes in functioning cerebral cortex. i. metabolic eects of epileptiform activity, Journal of neurophysiology, vol.34, p.735749, 1971. ,
In vivo measurement of pyridine nucleotide uorescence from cat brain cortex, Journal of applied physiology, vol.41, p.480488, 1976. ,
Cerebral cortical microuorometry at isosbestic wavelengths for correction of vascular artifact, Science, vol.205, p.693696, 1979. ,
semi-)quantitative analysis of reduced nicotinamide adenine dinucleotide uorescence images of blood-perfused rat heart, Biophysical journal, vol.72, p.18491860, 1997. ,
Preliminary study of detecting neoplastic growths in vivo with real time calibrated autouorescence imaging, Optics express, vol.11, p.291298, 2003. ,
Optical measurement of photosensitizer concentration using a probe with a small source-detector ber separation, p.1018, 2000. ,
Noninvasive measurement of uorophore concentration in turbid media with a simple uorescence /reectance ratio technique, Applied Optics, vol.40, p.63896395, 2001. ,
Laser-induced autouorescence diagnosis of tumors, Physica Scripta, p.87, 1997. ,
Photodetection with 5-aminolevulinic acid-induced protoporphyrin IX in the rat abdominal cavity : drug-dose-dependent uorescence kinetics, Photochemistry and photobiology, vol.72, p.521525, 2000. ,
Fluorophore quantitation in tissue-simulating media with confocal detection, IEEE Journal of Selected Topics in Quantum Electronics, vol.2, issue.4, p.959964, 1996. ,
DOI : 10.1109/2944.577322
Fiber-optic bundle design for quantitative uorescence measurement from tissue, Applied Optics, vol.37, p.74297436, 1998. ,
Recovery of turbidity free uorescence from measured uorescence : an experimental approach, Optics express, vol.11, p.33203331, 2003. ,
A one-layer model of laser-induced uorescence for diagnosis of disease in human tissue : applications to atherosclerosis, IEEE Transactions on Biomedical Engineering, vol.36, p.12221232, 1989. ,
Relation between uorescence spectra of dilute and turbid samples, Applied Optics, vol.33, p.414423, 1994. ,
Correction of the internal absorption eect in uorescence emission and excitation spectra from absorbing and highly scattering media : theory and experiment, Journal of biomedical optics, vol.3, p.171186, 1998. ,
Measurement of uorophore concentrations and uorescence quantum yield in tissue-simulating phantoms using three diffusion models of steady-state spatially resolved uorescence, Physics in medicine and biology, vol.48, p.41354149, 2003. ,
Near infrared optical tomography using NIRFAST: Algorithm for numerical model and image reconstruction, Communications in Numerical Methods in Engineering, vol.31, issue.3, p.711732, 2008. ,
DOI : 10.1002/cnm.1162
Fast segmentation and high-quality three-dimensional volume mesh creation from medical images for diuse optical tomography, Journal of Biomedical Optics, vol.18, issue.8, p.086007086007, 2013. ,
Diffuse optics for tissue monitoring and tomography, Diuse optics for tissue monitoring and tomography, p.76701, 2010. ,
DOI : 10.1088/0034-4885/73/7/076701
Method of obtaining optical sectioning by using structured light in a conventional microscope, Optics Letters, vol.22, issue.24, 1997. ,
DOI : 10.1364/OL.22.001905
Nonlinear structured-illumination microscopy: Wide-field fluorescence imaging with theoretically unlimited resolution, Proceedings of the National Academy of Sciences of the United States of America, p.1308113086, 2005. ,
DOI : 10.1073/pnas.0406877102
Optimization and characterization of a structured illumination microscope, Optics Express, vol.15, issue.24, p.1613016140, 2007. ,
DOI : 10.1364/OE.15.016130
Structured illumination microscopy using unknown speckle patterns, Nature Photonics, vol.19, issue.5, p.312315, 2012. ,
DOI : 10.1038/nphoton.2012.83
URL : https://hal.archives-ouvertes.fr/hal-00738270
Spatial Frequency Domain Imaging of Intrinsic Optical Property Contrast in a Mouse Model of Alzheimer???s Disease, Annals of Biomedical Engineering, vol.223, issue.2, p.13491357, 2011. ,
DOI : 10.1007/s10439-011-0269-6
Structured illumination enhances resolution and contrast in thick tissue uorescence imaging, Journal of Biomedical Optics, vol.15, issue.1, 2010. ,
Quantitative optical tomography of sub-surface heterogeneities using spatially modulated structured light, Optics Express, vol.17, issue.17, p.1478014790, 2009. ,
DOI : 10.1364/OE.17.014780
Review of tissue simulating phantoms for optical spectroscopy, imaging and dosimetry, Journal of Biomedical Optics, vol.11, issue.4, p.41102, 2006. ,
DOI : 10.1117/1.2335429
The optical properties of aqueous suspensions of Intralipid, a fat emulsion, Physics in Medicine and Biology, vol.34, issue.12, p.1927, 1989. ,
DOI : 10.1088/0031-9155/34/12/015
Light scattering in intralipid-10% in the wavelength range of 400-1100 nm, Applied Optics, vol.30, p.45074514, 1991. ,
Optical properties of intralipid : a phantom medium for light propagation studies, Lasers in surgery and medicine, p.510519, 1992. ,
Comparison of spatially and temporally resolved diuse-reectance measurement systems for determination of biomedical optical properties, Applied Optics, vol.42, p.46124620, 2003. ,
Performance assessment of photon migration instruments : the MEDPHOT protocol, Applied Optics, vol.44, p.21042114, 2005. ,
Tomographie optique proche infrarouge, résolue en temps, des milieux diusants, 2002. ,
Tissue-like phantoms for near-infrared fluorescence imaging system assessment and the training of surgeons, Journal of Biomedical Optics, vol.11, issue.1, p.14007, 2006. ,
DOI : 10.1117/1.2170579
A novel indocyanine green nanoparticle probe for non invasive uorescence imaging in vivo, SPIE, pp.71900-71900, 2009. ,
Lipidots: competitive organic alternative to quantum dots for in vivo fluorescence imaging, Journal of Biomedical Optics, vol.16, issue.9, p.09601309601310, 2011. ,
DOI : 10.1117/1.3625405
URL : https://hal.archives-ouvertes.fr/hal-01057405
Fluorescent Nanoprobes Dedicated to in Vivo Imaging: From Preclinical Validations to Clinical Translation, Molecules, vol.17, issue.12, p.55645591, 2012. ,
DOI : 10.3390/molecules17055564
Confocal imaging with bilateral scanning and array detectors, Journal of Microscopy, vol.165, issue.1, p.139146, 1992. ,
Pre-clinical optical molecular imaging in the lung : technological challenges and future prospects, Journal of Thoracic Disease, vol.4, pp.556-557, 2012. ,
Partial dierential equations with Fourier series and boundary value problems . Upper Saddle River, 2005. ,
Fourier series and boundary value problems, 2012. ,
Light distributions from point, line and plane sources for photochemical reactions and uorescence in turbid biological tissues, Photochemistry and photobiology, vol.67, p.2332, 1998. ,
Laser line scanning for uorescence reectance imaging : a phantom study and in vivo validation of the enhancement of contrast and resolutionDepth-Enhanced Fluorescence Imaging using Masked Detection of Structured Illumination, B.1 Revues à comité de lecture 1, p.14 ,
Background uorescence reduction and absorption correction for uorescence reectance imaging, Congrès internationaux 1 Proc. to BIOS congress, 2014. ,
Laser line scanning illumination scheme for the enhancement of contrast and resolution for uorescence reectance imaging, Proc. to BIOS congress, vol.8572, 2013. ,
Techniques d'illumination et de détection innovantes pour l'amélioration du contraste et de la résolution en imagerie moléculaire de uorescence en rétrodiusion, Congrès nationaux 1, 2014. ,