"CON-CON" assignment strategy for highly flexible intrinsically disordered proteins.

Abstract : Intrinsically disordered proteins (IDPs) are a class of highly flexible proteins whose characterization by NMR spectroscopy is complicated by severe spectral overlaps. The development of experiments designed to facilitate the sequence-specific assignment procedure is thus very important to improve the tools for the characterization of IDPs and thus to be able to focus on IDPs of increasing size and complexity. Here, we present and describe the implementation of a set of novel ¹H-detected 5D experiments, (HACA)CON(CACO)NCO(CA)HA, BT-(H)NCO(CAN)CONNH and BT-HN(COCAN)CONNH, optimized for the study of highly flexible IDPs that exploit the best resolved correlations, those involving the carbonyl and nitrogen nuclei of neighboring amino acids, to achieve sequence-specific resonance assignment. Together with the analogous recently proposed pulse schemes based on ¹³C detection, they form a complete set of experiments for sequence-specific assignment of highly flexible IDPs. Depending on the particular sample conditions (concentration, lifetime, pH, temperature, etc.), these experiments present certain advantages and disadvantages that will be discussed. Needless to say, that the availability of a variety of complementary experiments will be important for accurate determination of resonance frequencies in complex IDPs.
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Article dans une revue
Journal of Biomolecular NMR, Springer Verlag, 2014, 60 (4), pp.209-18
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http://hal.univ-grenoble-alpes.fr/hal-01119769
Contributeur : Frank Thomas <>
Soumis le : mardi 24 février 2015 - 09:14:46
Dernière modification le : lundi 19 février 2018 - 14:34:03

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  • HAL Id : hal-01119769, version 1
  • PUBMED : 25326659

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Alessandro Piai, Tomáš Hošek, Leonardo Gonnelli, Anna Zawadzka-Kazimierczuk, Wiktor Koźmiński, et al.. "CON-CON" assignment strategy for highly flexible intrinsically disordered proteins.. Journal of Biomolecular NMR, Springer Verlag, 2014, 60 (4), pp.209-18. 〈hal-01119769〉

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